BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B04LP1|AL429999
(950 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig623 791 0.0
>3x_Contig623
Length = 1951
Score = 791 bits (394), Expect = 0.0
Identities = 441/461 (95%), Gaps = 2/461 (0%)
Strand = Plus / Minus
Query: 207 gataaagaagtgggttggaaaggctcwaatacgttwrgactgtggagtgctttagaaagg 266
|||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||
Sbjct: 459 gataaagaagtgggttggaaaggctctaatacgtttggtctgtggagtgctttagaaagg 400
Query: 267 aataatttcgaagtagatttatcgtatttcaaaaamaaatccatatcattgtgtaagttc 326
||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||
Sbjct: 399 aataatttcgaagtagatttatcgtctttcaaacacaaatccatatcattgtgtaagttc 340
Query: 327 ttgatgaattgcgggaatactactaagaggkggtcacactcagagagggcwctgaamaca 386
||||||||||||||||||||| || ||||| ||||||||||||||||||| ||| | ||
Sbjct: 339 ttgatgaattgcgggaatacttctgagaggtggtcacactcagagagggctctggacacg 280
Query: 387 aaaaaatctgtacccttattgatcaattcggatgcaacgaaccttctcatcgattctggr 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttgaaatctgtacccttattgatcaattcggatgcaacgaaccttctcatcgattctgga 220
Query: 447 tcgttggctatgcctatcaatagttgcatccgtgggatcaattccggttgcatttccaaa 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tcgttggctatgcctatcaatagttgcatccgtgggatcaattccggttgcatttccaaa 160
Query: 507 tattcactaccggtcaactctctcttatgaatcaaaagaggacccgcattcctatgcacc 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tattcactaccggtcaactctctcttatgaatcaaaagaggacccgcattcctatgcacc 100
Query: 567 aatctgtaatcagattgtaccaactctcctttgaaccaatgtgggttatacactaattcc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aatctgtaatcagattgtaccaactctcctttgaaccaatgtgggttatacactaattcc 40
Query: 627 ttaaaatccacattgagaaacttcgtcggcacgttcacagc 667
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 39 ttaaaatccacattgagaaa--tcgtcggcacgttcacagc 1
Score = 287 bits (143), Expect = 3e-77
Identities = 162/169 (95%), Gaps = 2/169 (1%)
Strand = Plus / Minus
Query: 1 gatctgtactccgtgggaaaggttcacttcttcagttgtatcgtccatgtcatcgaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gatctgtactccgtgggaaaggttcacttcttcagttgtatcgtccatgtcatcgaagat 596
Query: 61 gaatagtagaacamgggagccaggaaatcaaaggcattctctatttcgtatcccctccca 120
|| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ga-tagt-gaacacgggagccaggaaatcaaaggcattctctatttcgtatcccctccca 538
Query: 121 gaatcttctggmaagagcatcggawtgaamatctcataaagtgwataag 169
||||||||||| |||||||||||| |||| ||||||||||||| |||||
Sbjct: 537 gaatcttctggcaagagcatcggattgaacatctcataaagtgtataag 489
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6740
Number of Sequences: 1807
Number of extensions: 6740
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 950
length of database: 10,358,551
effective HSP length: 16
effective length of query: 934
effective length of database: 10,329,639
effective search space: 9647882826
effective search space used: 9647882826
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)